UGC1O0001O16 - Full
Direct telomere:
CCCCAAAACCCCAAAACCCC
Complementary telomere:
GGGGTTTTGGGG
Sequence: 584
0001 ATTAAGCAGA ATCGATATAA AATAGTAAAA TGCTAATAAA TAATAATTGA TAAAATAGTA TTAACTCTAA AAAGAATAAA AAGATATCCG AACACCCGGA
0101 ATCGAACCAG GGACCGCCCG ATAACTGCGT ATCCTCTACA GTCGGGCGCT CTGCCATCTG AGCTATGTTC GGAAGTCATT AACTTACCAC ATATTTTCTC
0201 TTATAAAAGG TTCCATCAGG TGATATTTTC ACAAATTGTA GAAGGTGTAA TATCAGTTCC AGAGTGAGTA GAGAGATGAA TTTTGAAGGA AAGTATTTTC
0301 GCAGATCACT TTAAAAACTT TAAGACAGGG AGCATCTTGA ATTATTTATA GGTTTGTTGG CTATCATAGC ACTACTTCTA CTACTTTTAG ACTTTGATAA
0401 ACAGAAATAT AATCTCAGAG ATTGCAAAGT GATAAACAGG AATACAACTC TAGTCCAAGA CATAATCTCA TTCCAGCATA AATTTGTGAG AATACTAAAA
0501 GAGAGTGTTA GTGGCTCAAG AATTAAACTC TATCAAATAT TTTATTATCG ATTTAATTTG TTTATATTTT ATACTTTTAA AACT
Blast hits:
>gi|21242271|ref|NP_641853.1| heat-inducible transcriptional repressor [Xanthomonas axonopodis pv. citri str. 306]
>gi|24211778|sp|Q8PMB2|HRCA_XANAC Heat-inducible transcription repressor hrcA
>gi|21107698|gb|AAM36389.1| heat-inducible transcriptional repressor [Xanthomonas axonopodis pv. citri str. 306]
% id
alignment lenght
mismatches
gap openings
q start
q end
s start
s end
e-value
bit score
reading frame
36.67
60
38
1
275
96
29
82
0.063
38.51
Frame: 3 -
>gi|24211776|sp|Q8PAL1|HRCA_XANCP Heat-inducible transcription repressor hrcA
% id
alignment lenght
mismatches
gap openings
q start
q end
s start
s end
e-value
bit score
reading frame
36.67
60
38
1
275
96
29
82
0.082
38.12
Frame: 3 -
>gi|13879040|gb|AAG53934.2|AF302775_1 HrcA [Xanthomonas campestris pv. campestris]
% id
alignment lenght
mismatches
gap openings
q start
q end
s start
s end
e-value
bit score
reading frame
36.67
60
38
1
275
96
36
89
0.082
38.12
Frame: 3 -