UGC1O0003F23 - Details

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Direct telomere:

Sequence: 646

0001 AAAATGCAAA ATTATTAAGT GATTTTTGTG ATAATAATTT AATCAAAAGA AATTTAAATT GCAATAAAAG TAGAGGGGTG ATCCGAGAAT TGAACTCGGG

0101 ACCTCTCGCA CCCTAAGCGA GAATCATACC ACTAGACCAA ACACCCATGT TAGAGGTCTA CTGCTTTTTC CTGCCTATAT GCTATCGATC AACAACTTCA

0201 AAGCTAGTTC AAAAGTAATG TGAGAGTAAA GATAAATTTA ATCCAAATAT ACAAATTAAG GATTATTAGA ATGCTGAAAA ATCATAAATA GGGCAAAGAA

0301 AATATAACAG TGAATATTAA TTTGAGAATA AGATACTTAT TTAATCAAAC ACGGACAAAC AAACTAAATC ATGAACGTCC AAAGAAGCCT GAGATCTTAG

0401 AGAACAGACC TCCCTGTACT TTATATTTAG CAATTGACTC ATCCAAATCT GGATAGGTTA GGTAGGCTCC TGCAAGATCG AAGAACTGAG GAGTAGCTGG

0501 GACTGACTAG AATTTTGGGA TTGGGTTTAC AAGCTTGAAT TATTTACTGA TCTTTAGTTT ATCTACTTCA ATGGCCTTCT TATCTCCAAT TGTATTTTAT

0601 ATTTTGAGAT TCTTTCCTCC TTACTCAAGC ACATCCAATT TATCAT

Blast hits:


>gi|13811958|ref|NP_113087.1| hypothetical protein [Guillardia theta]
>gi|25396900|pir||G90120 hypothetical protein orf176 [imported] - Guillardia theta nucleomorph
>gi|13794283|gb|AAK39660.1|AF083031_17 hypothetical protein [Guillardia theta]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
52.08 48 23 1 74 217 21 65 0.002 43.51 Frame: 2 +


>gi|7511285|pir||T27979 hypothetical protein ZK678.4 - Caenorhabditis elegans

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
46.94 49 22 1 148 14 1 49 0.046 39.28 Frame: 2 -


>gi|15218782|ref|NP_174193.1| hypothetical protein; protein id: At1g28760.1 [Arabidopsis thaliana]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
48.65 37 19 0 205 95 8 44 0.06 38.89 Frame: 2 -


>gi|21291566|gb|EAA03711.1| ebiP6314 [Anopheles gambiae str. PEST]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
37.29 59 32 2 539 378 522 577 0.078 38.51 Frame: 3 -


>gi|21291596|gb|EAA03741.1| agCP14694 [Anopheles gambiae str. PEST]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
37.29 59 32 2 539 378 563 618 0.078 38.51 Frame: 3 -


>gi|3820482|gb|AAC69606.1| syntaxin 4 binding protein UNC-18c [Homo sapiens]
>gi|28838618|gb|AAH47764.1| syntaxin binding protein 3 [Homo sapiens]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
25.4 126 83 6 18 362 111 234 0.133 37.74 Frame: 3 +


>gi|6005886|ref|NP_009200.1| syntaxin binding protein 3; syntaxin 4 binding protein [Homo sapiens]
>gi|2810993|sp|O00186|STB3_HUMAN Syntaxin binding protein 3 (UNC-18 homolog 3) (UNC-18C) (UNC-18-3)
>gi|1944338|dbj|BAA19482.1| unc-18homologue [Homo sapiens]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
25.4 126 83 6 18 362 111 234 0.133 37.74 Frame: 3 +


>gi|17561446|ref|NP_506083.1| Signal recognition particle 68kD (70.6 kD) [Caenorhabditis elegans]
>gi|12230634|sp|Q20822|SR68_CAEEL Probable signal recognition particle 68 kDa protein (SRP68)
>gi|7504275|pir||T22716 hypothetical protein F55C5.8 - Caenorhabditis elegans
>gi|3947567|emb|CAB01573.1| Hypothetical protein F55C5.8 [Caenorhabditis elegans]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
35.59 59 38 1 602 426 524 571 0.133 37.74 Frame: 3 -


>gi|7493881|pir||S78737 protein YOL013w - yeast (Saccharomyces cerevisiae) delta remnant

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
48.72 39 10 1 145 59 18 56 0.227 36.96 Frame: 2 -


>gi|23612963|ref|NP_704502.1| hypothetical protein [Plasmodium falciparum 3D7]
>gi|23499241|emb|CAD51321.1| hypothetical protein [Plasmodium falciparum 3D7]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
24.39 82 62 1 610 365 5538 5609 0.296 36.58 Frame: 2 -


>gi|4584100|emb|CAB40588.1| hypothetical protein [Bacillus cereus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
35.56 45 29 0 536 402 61 105 0.861 35.04 Frame: 3 -


UGC1O0003F23 - Details

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Direct telomere:

Sequence: 449

0001 TTAAAGCTAA AATAAGGTGA TATCTGACAG TGATAATTTA ATCAATATAA TTTTACTTTA TAATATACTT TACAATTATG GAAAACTCAG ATAGTATGTA

0101 AATAGATACC ACCGCTGATC AAAACACAGA TGTGGACATG AATATCTAAC AAGAAGAGGA AGAGTAGCAA AAGAACTCAA TTCAAGACTT ACTTATTCTA

0201 GTAAAATCAT CTCAAAACCA AAACGGACTG AGACACAACG ATTATGGCAG ATATCATAAG TATTGTATTC GCAAGATTTA TCGCATGAGG AAATCACTCA

0301 AATTCACACA AGGCAGGAAG CAATACTCAC AGAAGTTGGT TACTCCAGCA GAAGCATCCA GGAACAATAA GTATCTGCTT TTAGTGATAT TCAAGTGCGA

0401 GGCAAACTGG GCCTCAGCTA TGCAGATGAA GCAAGTAATT AGTGGATAA

Blast hits:


>gi|18044248|gb|AAH20238.1|AAH20238 Unknown (protein for MGC:31966) [Homo sapiens]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
46.43 84 44 2 186 434 61 143 1.1e-013 75.87 Frame: 3 +


>gi|24497620|ref|NP_055045.2| signal recognition particle 68kDa [Homo sapiens]
>gi|22760309|dbj|BAC11145.1| unnamed protein product [Homo sapiens]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
46.43 84 44 2 186 434 61 143 1.1e-013 75.87 Frame: 3 +


>gi|26328771|dbj|BAC28124.1| unnamed protein product [Mus musculus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
46.43 84 44 2 186 434 60 142 1.1e-013 75.87 Frame: 3 +


>gi|12230640|sp|Q9UHB9|SR68_HUMAN Signal recognition particle 68 kDa protein (SRP68)
>gi|6690741|gb|AAF24308.1|AF195951_1 signal recognition particle 68 [Homo sapiens]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
46.43 84 44 2 186 434 53 135 1.1e-013 75.87 Frame: 3 +


>gi|18424534|ref|NP_568947.1| signal recognition particle - like protein; protein id: At5g61970.1, supported by cDNA: gi_15293136, supported by cDNA: gi_19310612 [Arabidopsis thaliana]
>gi|9758397|dbj|BAB08884.1| signal recognition particle 68kD protein-like [Arabidopsis thaliana]
>gi|15293137|gb|AAK93679.1| putative signal recognition particle protein [Arabidopsis thaliana]
>gi|19310613|gb|AAL85037.1| putative signal recognition particle protein [Arabidopsis thaliana]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
40.23 87 52 1 186 446 31 116 1.4e-013 75.48 Frame: 3 +


>gi|134889|sp|Q00004|SR68_CANFA Signal recognition particle 68 kDa protein (SRP68)
>gi|227342|prf||1702226A SRP68 protein

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
45.24 84 45 2 186 434 58 140 2.4e-013 74.71 Frame: 3 +


>gi|7513444|pir||A58947 signal recognition particle 68K protein - dog
>gi|932|emb|CAA37773.1| 68kDA subunit of signal recognition particle [Canis familiaris]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
45.24 84 45 2 186 434 52 134 2.4e-013 74.71 Frame: 3 +


>gi|17561446|ref|NP_506083.1| Signal recognition particle 68kD (70.6 kD) [Caenorhabditis elegans]
>gi|12230634|sp|Q20822|SR68_CAEEL Probable signal recognition particle 68 kDa protein (SRP68)
>gi|7504275|pir||T22716 hypothetical protein F55C5.8 - Caenorhabditis elegans
>gi|3947567|emb|CAB01573.1| Hypothetical protein F55C5.8 [Caenorhabditis elegans]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
40.2 102 55 1 135 422 4 105 3.4e-012 70.86 Frame: 3 +


>gi|21291596|gb|EAA03741.1| agCP14694 [Anopheles gambiae str. PEST]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
34.15 123 76 4 81 434 8 127 7.6e-012 69.71 Frame: 3 +


>gi|21355591|ref|NP_648273.1| CG5064-PA [Drosophila melanogaster]
>gi|12230644|sp|Q9VSS2|SR68_DROME Probable signal recognition particle 68 kDa protein (SRP68)
>gi|7295013|gb|AAF50341.1| CG5064-PA [Drosophila melanogaster]
>gi|16198221|gb|AAL13927.1| LD41750p [Drosophila melanogaster]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
35.79 95 57 2 162 434 24 118 3.8e-011 67.4 Frame: 3 +


>gi|21291566|gb|EAA03711.1| ebiP6314 [Anopheles gambiae str. PEST]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
39.53 86 48 2 189 434 1 86 6.4e-011 66.63 Frame: 3 +


>gi|27690562|ref|XP_221130.1| similar to Signal recognition particle 68 kDa protein (SRP68) [Rattus norvegicus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
47.17 53 27 1 189 344 38 90 2.1e-006 51.6 Frame: 3 +


>gi|2126661|pir||S61075 M protein precursor - Streptococcus pyogenes (serotype M31) (fragment)
>gi|1235811|gb|AAA99559.1| emml gene product

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
27.59 87 60 2 90 341 2 85 0.055 36.96 Frame: 3 +


>gi|23490242|gb|EAA22067.1| Drosophila melanogaster CG15040 gene product [Plasmodium yoelii yoelii]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
26.8 97 71 3 84 374 365 447 0.071 36.58 Frame: 3 +


>gi|15078861|ref|NP_149611.1| 148R [Invertebrate iridescent virus 6]
>gi|7461110|pir||T03089 conserved hypothetical protein 074R - Chilo iridescent virus
>gi|2738436|gb|AAB94463.1| 148R [Chilo iridescent virus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
23.48 132 100 4 5 397 156 264 0.159 35.42 Frame: 2 +


>gi|6678121|ref|NP_033293.1| salivary protein 1 [Mus musculus]
>gi|111006|pir||A30305 submandibular gland protein (spot 1) precursor - mouse
>gi|201045|gb|AAA40132.1| salivary protein 1 precursor

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
39.53 43 26 1 81 209 85 126 0.271 34.65 Frame: 3 +


>gi|134459|sp|P02815|SG16_MOUSE 16.5 KD SUBMANDIBULAR GLAND GLYCOPROTEIN PRECURSOR (SALIVARY PROTEIN 1)
>gi|72191|pir||WMMS16 submandibular gland 16.5K protein - mouse
>gi|51368|emb|CAA25098.1| put. secreted sub-maxillary glycoprotein [Mus musculus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
39.53 43 26 1 81 209 85 126 0.271 34.65 Frame: 3 +


>gi|23509540|ref|NP_702207.1| hypothetical protein [Plasmodium falciparum 3D7]
>gi|23497387|gb|AAN36931.1|AE014821_18 hypothetical protein [Plasmodium falciparum 3D7]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
23.48 115 80 1 54 374 1738 1852 0.354 34.27 Frame: 3 +


>gi|23619117|ref|NP_705079.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein [Plasmodium falciparum 3D7]
>gi|23615324|emb|CAD52315.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein [Plasmodium falciparum 3D7]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
27.27 55 39 1 81 242 7 61 0.605 33.5 Frame: 3 +


>gi|17232403|ref|NP_488951.1| unknown protein [Nostoc sp. PCC 7120]
>gi|25534074|pir||AG2419 hypothetical protein alr4911 [imported] - Nostoc sp. (strain PCC 7120)
>gi|17134049|dbj|BAB76610.1| ORF_ID:alr4911~unknown protein [Nostoc sp. PCC 7120]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
35.71 56 31 1 248 400 210 265 0.605 33.5 Frame: 2 +


>gi|7657896|emb|CAB89150.1| gp160 protein [Human immunodeficiency virus 1]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
38.3 47 29 0 66 206 621 667 0.79 33.11 Frame: 3 +


>gi|15233570|ref|NP_193212.1| centromere protein homolog; protein id: At4g14760.1 [Arabidopsis thaliana]
>gi|7488075|pir||E71410 probable centromere protein - Arabidopsis thaliana
>gi|2244833|emb|CAB10255.1| centromere protein homolog [Arabidopsis thaliana]
>gi|7268182|emb|CAB78518.1| centromere protein homolog [Arabidopsis thaliana]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
27.94 68 49 0 170 373 1146 1213 0.79 33.11 Frame: 2 +


>gi|23394712|gb|AAN31568.1| envelope glycoprotein [Human immunodeficiency virus type 1]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
38.64 44 27 0 75 206 13 56 0.79 33.11 Frame: 3 +


>gi|28829810|gb|AAO52312.1| similar to Dictyostelium discoideum (Slime mold). Ubiquitin hydrolase B (Fragment)

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
22.41 58 45 0 84 257 217 274 0.79 33.11 Frame: 3 +