UGC1O0005O22 - Full
Direct telomere:
CCCCAAAACCCCAAAACCCC
Sequence: 490
0001 ATGAATGAAT TATTCAAGTA AACAAAGTGA ACATAAATCT GATAATTTTA TGGATTTTAA GGGTGTGTTT ATAAGATAAT TATGAGAAAA TTGGCTTTCA
0101 AAACTTTAGA AGATAGAGAT TAAATTGCTC GTTCAGCAGA TAATATATGA ACGAAAATGC GGAGGATGGA TAGAGCGGGT ATGTAGTGTA GTGGTATCAC
0201 GTTCGCTTCG CATGCGANAG GCCCCGGGTT CAAATCCCGG CTTATCCATA TCTTTTTATA CAGCCGTGAT ATATACATAT AACTAGATTT AAGTGACAAT
0301 TAATGACAAT TAAGATTAAT ATAAATACAC AAATTAAGTC AACTTCTAAG AGAATCAACG AATGGTGGAA AATTAGGTCA TTTCAGTAGT TAAAAAATTG
0401 GGATGCATGT CTCTGTTGTG ATATTATTTC TCTCTGGGAG CAAATATTTT AATTTGCCTG ATGTGAGTGT CTCTTCCTGA ATGTTGATTT
Blast hits:
>gi|21288110|gb|EAA00431.1| agCP9951 [Anopheles gambiae str. PEST]
% id
alignment lenght
mismatches
gap openings
q start
q end
s start
s end
e-value
bit score
reading frame
47.73
44
23
0
489
358
142
185
0.0002
46.21
Frame: 1 -
>gi|28573741|ref|NP_611223.4| CG11419-PA [Drosophila melanogaster]
>gi|21406644|gb|AAL48829.2| RE25242p [Drosophila melanogaster]
>gi|28380763|gb|AAF57848.2| CG11419-PA [Drosophila melanogaster]
% id
alignment lenght
mismatches
gap openings
q start
q end
s start
s end
e-value
bit score
reading frame
43.18
44
25
0
489
358
152
195
0.002
43.13
Frame: 1 -
>gi|5091606|gb|AAD39595.1|AC007858_9 ESTs dbj|D15316 and dbj|C98044 come from this gene. [Oryza sativa]
% id
alignment lenght
mismatches
gap openings
q start
q end
s start
s end
e-value
bit score
reading frame
45.45
44
24
1
489
358
160
201
0.004
41.97
Frame: 1 -
UGC1O0005O22 - Full Direct telomere: CCCCAAAACCCCAAAACCCC Sequence: 587 0001 ATAAATCTGA TAAAGTGTTG GTTGAGTAAA TCAATTTGAA TTTTAAATTG AATTGTAATT ATAAATTTAG AAATGGTAGA TTATGGAAAC AATAACAACA 0101 TGGTTGAATA GTCATAGAAC TCTTCACATC TTGACCTCTC TATCAACCCC AATTATGTTT AAGGTATTCT AAATTATTTG ATAATAACTT ATTATAACAT 0201 AAAACCTATT TAGCTAACTT GGGCAGCCCA TAAGTCCCTG AGGCAAATTC ATAGAGAAGA GAAATTGGAG ATTTAGCTGT TTGGACGCTT TCGTCCGCTA 0301 AGCCTGGAAA CGGAGTTGAG TAAATCAGAG ATGACTAAGT CTCTACTTTT TGGCAGTAAG TAATTACTAT TAATACAGTA TCAATTACGA ATCTATAATA 0401 AATAAGAGAA TATAATTTGT TTAATAGATC TGATGGGACT TAGCCTCACT ATGTAAACAT ACAATTTTTG AAGAAAATGA GAGTTTAAGA GATATCGTTG 0501 TATTTGGACT TCAAGACTGA TGAATCTTAC ACTCCTTCAA AAATATCAAT CAGAGTTGGT AATAGTTTCT ACGAATTGCA GGAAGTG Blast hits: >gi|27658902|ref|XP_226386.1| similar to RIKEN cDNA 1500026N15 [Mus musculus] [Rattus norvegicus]
>gi|20885472|ref|XP_134416.1| RIKEN cDNA 1500026N15 [Mus musculus]
>gi|16975123|pdb|1JHJ|A Chain A, Crystal Structure Of The Apc10DOC1 SUBUNIT OF THE HUMAN Anaphase-Promoting Complex
% id
alignment lenght
mismatches
gap openings
q start
q end
s start
s end
e-value
bit score
reading frame
48.33
120
62
1
228
587
13
108
4.1e-025
115.5
Frame: 3 +
>gi|21618682|gb|AAH31460.1| RIKEN cDNA 1500026N15 gene [Mus musculus]
>gi|26334441|dbj|BAC30921.1| unnamed protein product [Mus musculus]
% id
alignment lenght
mismatches
gap openings
q start
q end
s start
s end
e-value
bit score
reading frame
48.33
120
62
1
228
587
13
108
4.1e-025
115.5
Frame: 3 +
% id
alignment lenght
mismatches
gap openings
q start
q end
s start
s end
e-value
bit score
reading frame
48.33
120
62
1
228
587
12
107
5.3e-025
115.2
Frame: 3 +