UGC1O0005O22 - Details

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Direct telomere:

Sequence: 490

0001 ATGAATGAAT TATTCAAGTA AACAAAGTGA ACATAAATCT GATAATTTTA TGGATTTTAA GGGTGTGTTT ATAAGATAAT TATGAGAAAA TTGGCTTTCA

0101 AAACTTTAGA AGATAGAGAT TAAATTGCTC GTTCAGCAGA TAATATATGA ACGAAAATGC GGAGGATGGA TAGAGCGGGT ATGTAGTGTA GTGGTATCAC

0201 GTTCGCTTCG CATGCGANAG GCCCCGGGTT CAAATCCCGG CTTATCCATA TCTTTTTATA CAGCCGTGAT ATATACATAT AACTAGATTT AAGTGACAAT

0301 TAATGACAAT TAAGATTAAT ATAAATACAC AAATTAAGTC AACTTCTAAG AGAATCAACG AATGGTGGAA AATTAGGTCA TTTCAGTAGT TAAAAAATTG

0401 GGATGCATGT CTCTGTTGTG ATATTATTTC TCTCTGGGAG CAAATATTTT AATTTGCCTG ATGTGAGTGT CTCTTCCTGA ATGTTGATTT

Blast hits:


>gi|21288110|gb|EAA00431.1| agCP9951 [Anopheles gambiae str. PEST]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
47.73 44 23 0 489 358 142 185 0.0002 46.21 Frame: 1 -


>gi|28573741|ref|NP_611223.4| CG11419-PA [Drosophila melanogaster]
>gi|21406644|gb|AAL48829.2| RE25242p [Drosophila melanogaster]
>gi|28380763|gb|AAF57848.2| CG11419-PA [Drosophila melanogaster]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
43.18 44 25 0 489 358 152 195 0.002 43.13 Frame: 1 -


>gi|5091606|gb|AAD39595.1|AC007858_9 ESTs dbj|D15316 and dbj|C98044 come from this gene. [Oryza sativa]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
45.45 44 24 1 489 358 160 201 0.004 41.97 Frame: 1 -


>gi|21592739|gb|AAM64688.1| unknown [Arabidopsis thaliana]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
40.91 44 26 1 489 358 151 192 0.091 37.35 Frame: 1 -


>gi|18398701|ref|NP_565433.1| expressed protein; protein id: At2g18290.1, supported by cDNA: 32047. [Arabidopsis thaliana]
>gi|20197809|gb|AAD15507.2| expressed protein [Arabidopsis thaliana]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
40.91 44 26 1 489 358 151 192 0.091 37.35 Frame: 1 -


>gi|27658942|ref|XP_226385.1| similar to anaphase-promoting complex 10 [Homo sapiens] [Rattus norvegicus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
38.64 44 27 1 489 358 71 112 0.588 34.65 Frame: 1 -


>gi|25050805|ref|XP_198051.1| hypothetical protein XP_198051 [Mus musculus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
33.93 56 33 1 212 57 30 85 0.588 34.65 Frame: 3 -


>gi|20885472|ref|XP_134416.1| RIKEN cDNA 1500026N15 [Mus musculus]
>gi|21618682|gb|AAH31460.1| RIKEN cDNA 1500026N15 gene [Mus musculus]
>gi|26334441|dbj|BAC30921.1| unnamed protein product [Mus musculus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
38.64 44 27 1 489 358 144 185 0.588 34.65 Frame: 1 -


>gi|4836700|gb|AAD30527.1| anaphase promoting complex subunit 10 [Homo sapiens]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
38.64 44 27 1 489 358 144 185 0.588 34.65 Frame: 1 -


>gi|6463666|dbj|BAA86953.1| APC10 [Homo sapiens]
>gi|13528834|gb|AAH05217.1|AAH05217 Unknown (protein for MGC:12234) [Homo sapiens]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
38.64 44 27 1 489 358 144 185 0.588 34.65 Frame: 1 -


>gi|12837763|dbj|BAB23942.1| unnamed protein product [Mus musculus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
38.64 44 27 1 489 358 80 121 0.588 34.65 Frame: 1 -


>gi|22213624|gb|AAM93472.1| AmpR transcriptional regulator [Citrobacter freundii]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
33.33 42 28 0 176 51 235 276 0.768 34.27 Frame: 3 -


>gi|113752|sp|P12529|AMPR_CITFR TRANSCRIPTIONAL ACTIVATOR PROTEIN AMPR
>gi|736669|gb|AAA64510.1| ampR

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
33.33 42 28 0 176 51 235 276 0.768 34.27 Frame: 3 -


>gi|95547|pir||A32882 ampR protein - Citrobacter freundii

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
33.33 42 28 0 176 51 235 276 0.768 34.27 Frame: 3 -


UGC1O0005O22 - Details

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Direct telomere:

Sequence: 587

0001 ATAAATCTGA TAAAGTGTTG GTTGAGTAAA TCAATTTGAA TTTTAAATTG AATTGTAATT ATAAATTTAG AAATGGTAGA TTATGGAAAC AATAACAACA

0101 TGGTTGAATA GTCATAGAAC TCTTCACATC TTGACCTCTC TATCAACCCC AATTATGTTT AAGGTATTCT AAATTATTTG ATAATAACTT ATTATAACAT

0201 AAAACCTATT TAGCTAACTT GGGCAGCCCA TAAGTCCCTG AGGCAAATTC ATAGAGAAGA GAAATTGGAG ATTTAGCTGT TTGGACGCTT TCGTCCGCTA

0301 AGCCTGGAAA CGGAGTTGAG TAAATCAGAG ATGACTAAGT CTCTACTTTT TGGCAGTAAG TAATTACTAT TAATACAGTA TCAATTACGA ATCTATAATA

0401 AATAAGAGAA TATAATTTGT TTAATAGATC TGATGGGACT TAGCCTCACT ATGTAAACAT ACAATTTTTG AAGAAAATGA GAGTTTAAGA GATATCGTTG

0501 TATTTGGACT TCAAGACTGA TGAATCTTAC ACTCCTTCAA AAATATCAAT CAGAGTTGGT AATAGTTTCT ACGAATTGCA GGAAGTG

Blast hits:


>gi|27658902|ref|XP_226386.1| similar to RIKEN cDNA 1500026N15 [Mus musculus] [Rattus norvegicus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
48.33 120 62 1 228 587 13 108 4.1e-025 115.5 Frame: 3 +


>gi|20885472|ref|XP_134416.1| RIKEN cDNA 1500026N15 [Mus musculus]
>gi|21618682|gb|AAH31460.1| RIKEN cDNA 1500026N15 gene [Mus musculus]
>gi|26334441|dbj|BAC30921.1| unnamed protein product [Mus musculus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
48.33 120 62 1 228 587 13 108 4.1e-025 115.5 Frame: 3 +


>gi|16975123|pdb|1JHJ|A Chain A, Crystal Structure Of The Apc10DOC1 SUBUNIT OF THE HUMAN Anaphase-Promoting Complex

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
48.33 120 62 1 228 587 12 107 5.3e-025 115.2 Frame: 3 +


>gi|4836700|gb|AAD30527.1| anaphase promoting complex subunit 10 [Homo sapiens]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
48.33 120 62 1 228 587 13 108 5.3e-025 115.2 Frame: 3 +


>gi|7657035|ref|NP_055700.1| anaphase-promoting complex 10 [Homo sapiens]
>gi|7512765|pir||T12476 hypothetical protein DKFZp564L0562.1 - human
>gi|5262509|emb|CAB45705.1| hypothetical protein [Homo sapiens]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
48.33 120 62 1 228 587 13 108 5.3e-025 115.2 Frame: 3 +


>gi|6463666|dbj|BAA86953.1| APC10 [Homo sapiens]
>gi|13528834|gb|AAH05217.1|AAH05217 Unknown (protein for MGC:12234) [Homo sapiens]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
48.33 120 62 1 228 587 13 108 5.3e-025 115.2 Frame: 3 +


>gi|18398701|ref|NP_565433.1| expressed protein; protein id: At2g18290.1, supported by cDNA: 32047. [Arabidopsis thaliana]
>gi|20197809|gb|AAD15507.2| expressed protein [Arabidopsis thaliana]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
48.18 110 57 1 258 587 28 113 8.5e-023 107.8 Frame: 3 +


>gi|21592739|gb|AAM64688.1| unknown [Arabidopsis thaliana]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
47.27 110 58 1 258 587 28 113 1.9e-022 106.7 Frame: 3 +


>gi|5091606|gb|AAD39595.1|AC007858_9 ESTs dbj|D15316 and dbj|C98044 come from this gene. [Oryza sativa]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
43.44 122 69 2 222 587 26 122 3.2e-022 105.9 Frame: 3 +


>gi|21288110|gb|EAA00431.1| agCP9951 [Anopheles gambiae str. PEST]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
45.83 120 65 1 228 587 11 106 2.7e-021 102.8 Frame: 3 +


>gi|28573741|ref|NP_611223.4| CG11419-PA [Drosophila melanogaster]
>gi|21406644|gb|AAL48829.2| RE25242p [Drosophila melanogaster]
>gi|28380763|gb|AAF57848.2| CG11419-PA [Drosophila melanogaster]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
46.36 110 59 1 258 587 31 116 4e-020 98.98 Frame: 3 +


>gi|19112595|ref|NP_595803.1| anaphase promoting complex subunit [Schizosaccharomyces pombe]
>gi|26390994|sp|O42971|AN10_SCHPO Anaphase promoting factor component 10 (APC10)
>gi|7490665|pir||T39849 anaphase promoting complex component apc10 - fission yeast (Schizosaccharomyces pombe)
>gi|2842526|emb|CAA16839.1| anaphase promoting complex subunit [Schizosaccharomyces pombe]
>gi|3393013|emb|CAA20105.1| SPBC1A4.01 [Schizosaccharomyces pombe]
>gi|3402334|dbj|BAA32157.1| Apc10 (anaphase promoting complex) [Schizosaccharomyces pombe]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
36.7 109 69 1 261 587 25 109 5e-015 82.03 Frame: 3 +


>gi|25411854|pir||F84562 hypothetical protein At2g18290 [imported] - Arabidopsis thaliana

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
62.26 53 20 0 429 587 40 92 1.4e-012 73.94 Frame: 3 +


>gi|12718366|emb|CAC28560.1| related to anaphase promoting complex subunit 10 [Neurospora crassa]
>gi|28925277|gb|EAA34356.1| hypothetical protein ( (AL513409) related to anaphase promoting complex subunit 10 [Neurospora crassa] )

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
34.86 109 71 1 258 584 185 269 5.2e-012 72.02 Frame: 3 +


>gi|23479928|gb|EAA16627.1| Drosophila melanogaster CG11419 gene product-related [Plasmodium yoelii yoelii]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
29.5 139 98 2 165 581 28 136 4.4e-011 68.94 Frame: 3 +


>gi|23508866|ref|NP_701534.1| hypothetical protein [Plasmodium falciparum 3D7]
>gi|23496702|gb|AAN36258.1|AE014846_57 hypothetical protein [Plasmodium falciparum 3D7]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
27.78 144 100 3 162 581 91 210 8.3e-010 64.7 Frame: 3 +


>gi|12837763|dbj|BAB23942.1| unnamed protein product [Mus musculus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
61.36 44 17 0 456 587 1 44 1.8e-009 63.54 Frame: 3 +


>gi|6321197|ref|NP_011274.1| Doc1p and Cdc26p are associated with the anaphase-promoting complex and are involved in the degradation of Clb2p; Doc1p [Saccharomyces cerevisiae]
>gi|1723976|sp|P53068|AN10_YEAST Anaphase promoting factor component 10 (APC10)
>gi|1077171|pir||S53941 hypothetical protein YGL240w - yeast (Saccharomyces cerevisiae)
>gi|793873|emb|CAA89016.1| HRC283 [Saccharomyces cerevisiae]
>gi|1322905|emb|CAA96959.1| ORF YGL240w [Saccharomyces cerevisiae]
>gi|1589353|prf||2210407H HRC283 gene

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
33.64 110 68 2 273 587 120 205 1.6e-008 60.46 Frame: 3 +


>gi|20149881|pdb|1GQP|A Chain A, Apc10DOC1 SUBUNIT OF S. CEREVISIAE
>gi|20149882|pdb|1GQP|B Chain B, Apc10DOC1 SUBUNIT OF S. CEREVISIAE

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
33.64 110 68 2 273 587 58 143 1.6e-008 60.46 Frame: 3 +


>gi|1945308|emb|CAA96958.1| ORF YGL240w [Saccharomyces cerevisiae]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
33.64 110 68 2 273 587 43 128 1.6e-008 60.46 Frame: 3 +


>gi|12311875|emb|CAC22691.1| hypothetical protein L2743.11 [Leishmania major]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
30.77 104 71 2 279 587 74 153 2.5e-006 53.14 Frame: 3 +


>gi|19173638|ref|NP_597441.1| hypothetical protein [Encephalitozoon cuniculi]
>gi|19170844|emb|CAD26618.1| hypothetical protein [Encephalitozoon cuniculi]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
37.74 53 33 0 429 587 28 80 0.0003 46.21 Frame: 3 +


>gi|17559738|ref|NP_505679.1| Anaphase-Promoting complex [Caenorhabditis elegans]
>gi|7499210|pir||T20998 hypothetical protein F15H10.3 - Caenorhabditis elegans
>gi|3875998|emb|CAA98261.1| Hypothetical protein F15H10.3 [Caenorhabditis elegans]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
34.78 46 30 0 426 563 52 97 0.083 38.12 Frame: 3 +


>gi|26988049|ref|NP_743474.1| oxidoreductase, aldo/keto reductase family [Pseudomonas putida KT2440]
>gi|24982771|gb|AAN66938.1|AE016322_5 oxidoreductase, aldo/keto reductase family [Pseudomonas putida KT2440]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
38.46 52 30 1 258 407 74 125 0.703 35.04 Frame: 3 +


>gi|23509601|ref|NP_702268.1| hypothetical protein [Plasmodium falciparum 3D7]
>gi|23497449|gb|AAN36992.1|AE014822_27 hypothetical protein [Plasmodium falciparum 3D7]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
25.2 123 81 5 82 417 375 494 0.703 35.04 Frame: 1 +


>gi|23510068|ref|NP_702734.1| hypothetical protein [Plasmodium falciparum 3D7]
>gi|6562716|emb|CAB62855.1| hypothetical protein [Plasmodium falciparum 3D7]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
34.21 38 25 0 61 174 170 207 0.918 34.65 Frame: 1 +


>gi|20883394|ref|XP_137673.1| similar to data source:SPTR, source key:P08240, evidence:ISS~homolog to SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA SUBUNIT (SR-ALPHA) (DOCKING PROTEIN ALPHA) (DP-ALPHA)~putative [Mus musculus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
29.51 61 42 2 408 587 301 360 0.918 34.65 Frame: 3 +


>gi|28511199|ref|XP_284930.1| similar to KIAA0399 protein [Homo sapiens] [Mus musculus]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
29.51 61 42 2 408 587 203 262 0.918 34.65 Frame: 3 +


>gi|28828666|gb|AAO51269.1| similar to Plasmodium falciparum. Hypothetical protein [Dictyostelium discoideum]

% id alignment lenght mismatches gap openings q start q end s start s end e-value bit score reading frame
24.47 188 123 7 61 567 637 796 0.918 34.65 Frame: 1 +